PDBx/mmCIF data files to include PI information

JY
Jasmine Young
Mon, Jul 26, 2021 5:56 PM

wwPDB continues to support research, education, and drug discovery
worldwide. Open access to PDB data has helped researchers in
structure-guided discovery and development of anti-coronavirus drugs,
vaccines and neutralizing antibodies. When researchers analyze existing
PDB structures, such as working on a similar structure, they may often
need additional information impossible to retrieve from the PDB entry
file alone. In particular, it is not possible to obtain a point of
contact in cases where there is no associated primary publication for an
entry.

Following a recommendation from the IUCr Commission on Biological
Macromolecules and the IUCr Committee on Data
(https://journals.iucr.org/a/issues/2020/06/00/es5023/index.html#SEC4.4),
wwPDB will make public the PI name, email address, and ORCiD ID for
initial PDB depositions or re-submissions made, starting September 24,
2021. This will enable contact with the authors of every released PDB
structure as of that date. This release will also align the PDB with the
standard practices of providing corresponding author information by
scientific journals

The dated acceptance of these PDB Terms and Conditions described above
will be captured within the OneDep system. The responsible depositor who
creates the deposition should make entry PI(s) aware of the policy
change to include PI name, email address, and ORCiD in public PDBx/mmCIF
files.

--
Regards,

Jasmine

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Jasmine Young, Ph.D.
Biocuration Team Lead
RCSB Protein Data Bank
Research Professor
Institute for Quantitative Biomedicine
Rutgers, The State University of New Jersey
174 Frelinghuysen Rd
Piscataway, NJ 08854-8087

Email: jasmine@rcsb.rutgers.edu
Phone: (848)445-0103 ext 4920
Fax: (732)445-4320

---==========================

wwPDB continues to support research, education, and drug discovery worldwide. Open access to PDB data has helped researchers in structure-guided discovery and development of anti-coronavirus drugs, vaccines and neutralizing antibodies. When researchers analyze existing PDB structures, such as working on a similar structure, they may often need additional information impossible to retrieve from the PDB entry file alone. In particular, it is not possible to obtain a point of contact in cases where there is no associated primary publication for an entry. Following a recommendation from the IUCr Commission on Biological Macromolecules and the IUCr Committee on Data (https://journals.iucr.org/a/issues/2020/06/00/es5023/index.html#SEC4.4), wwPDB will make public the PI name, email address, and ORCiD ID for initial PDB depositions or re-submissions made, starting September 24, 2021. This will enable contact with the authors of every released PDB structure as of that date. This release will also align the PDB with the standard practices of providing corresponding author information by scientific journals The dated acceptance of these PDB Terms and Conditions described above will be captured within the OneDep system. The responsible depositor who creates the deposition should make entry PI(s) aware of the policy change to include PI name, email address, and ORCiD in public PDBx/mmCIF files. -- Regards, Jasmine =========================================================== Jasmine Young, Ph.D. Biocuration Team Lead RCSB Protein Data Bank Research Professor Institute for Quantitative Biomedicine Rutgers, The State University of New Jersey 174 Frelinghuysen Rd Piscataway, NJ 08854-8087 Email: jasmine@rcsb.rutgers.edu Phone: (848)445-0103 ext 4920 Fax: (732)445-4320 ===========================================================