All the links got stripped out in my previous message. I'll try again:
FirstGlance in Jmol http://firstglance.jmol.org
Unique capabilities and conveniences http://firstglance.jmol.org/whatis.htm#unique
Design goals https://www.youtube.com/watch?v=80og2ASrvnQ&t=76s
ConSurf Server results in FirstGlance http://firstglance.jmol.org/notes.htm#consurf
Spreadsheet-ready lists:
- Atoms contacting any moiety you specify with bond types, distances, and conservation levels http://firstglance.jmol.org/contacts-1igt-250-474-chain-D.html
- All salt bridges http://firstglance.jmol.org/imgs/1zms-sb-bu2-consurf-apd1.06.html
Illustrations of electrostatic potential maps available through FirstGlance (by iCn3D) https://proteopedia.org/wiki/index.php/Electrostatic_potential_maps
Rocking animations made with a few mouse clicks: https://tinyurl.com/movingmolecules
Instructions for capturing more complex movies, with examples: http://firstglance.jmol.org/videocapture.htm
ALL IMPROVEMENTS in the new FirstGlance in Jmol: http://firstglance.jmol.org/versions.htm
Virus capsids, clathrin cages, bacterial gas vesicles viewed in FirstGlance: https://proteopedia.org/w/FirstGlance/Virus_Capsids_and_Other_Large_Assemblies
Demo of visualizing and vetting protein crosslinks (e.g. isopeptide bonds) in FirstGlance using electron density maps: https://www.youtube.com/watch?v=fjir4cqsI3U
-Eric
All the links got stripped out in my previous message. I'll try again:
FirstGlance in Jmol http://firstglance.jmol.org
Unique capabilities and conveniences http://firstglance.jmol.org/whatis.htm#unique
Design goals https://www.youtube.com/watch?v=80og2ASrvnQ&t=76s
ConSurf Server results in FirstGlance http://firstglance.jmol.org/notes.htm#consurf
Spreadsheet-ready lists:
- Atoms contacting any moiety you specify with bond types, distances, and conservation levels http://firstglance.jmol.org/contacts-1igt-250-474-chain-D.html
- All salt bridges http://firstglance.jmol.org/imgs/1zms-sb-bu2-consurf-apd1.06.html
Illustrations of electrostatic potential maps available through FirstGlance (by iCn3D) https://proteopedia.org/wiki/index.php/Electrostatic_potential_maps
Rocking animations made with a few mouse clicks: https://tinyurl.com/movingmolecules
Instructions for capturing more complex movies, with examples: http://firstglance.jmol.org/videocapture.htm
ALL IMPROVEMENTS in the new FirstGlance in Jmol: http://firstglance.jmol.org/versions.htm
Virus capsids, clathrin cages, bacterial gas vesicles viewed in FirstGlance: https://proteopedia.org/w/FirstGlance/Virus_Capsids_and_Other_Large_Assemblies
Demo of visualizing and vetting protein crosslinks (e.g. isopeptide bonds) in FirstGlance using electron density maps: https://www.youtube.com/watch?v=fjir4cqsI3U
-Eric