Dear PDB-l
We are excited to announce the launch of a detailed PDBx/mmCIF format user
guide https://mmcif.wwpdb.org/docs/user-guide/guide.html. As the
foundation for depositing, annotating, and archiving structural data across
diverse experimental techniques, the Protein Data Bank Exchange
macromolecular Crystallographic Information Framework (PDBx/mmCIF) stands
as a master format of the Protein Data Bank. Our user-friendly guide offers
detailed explanation and examples of essential PDBx/mmCIF records, aimed to
facilitate a smooth transition to this format for depositors and users
alike.
The wwPDB anticipates that all four-character PDB IDs will be exhausted by
2028, after which 12-character PDB IDs will be issued. Entries with
extended PDB IDs will not be compatible with the legacy PDB file format and
will only be available in PDBx/mmCIF format. wwPDB encourages users to
transition to the PDBx/mmCIF format as soon as possible.
We invite all users to participate in a brief survey
https://rutgers.ca1.qualtrics.com/jfe/form/SV_ebusbrMCmLbB0WO which is
accessible at PDBx/mmCIF format user guide
https://mmcif.wwpdb.org/docs/user-guide/guide.html to share their
feedback on this PDBx/mmCIF user guide by December 15, 2024. Your feedback
will greatly contribute to future developments.
--
YUHE LIANG, Ph.D.
Biocuration Lead Deputy, RCSB Protein Data Bank
Research Associate, Institute for Quantitative Biomedicine
Rutgers, The State University of New Jersey
174 Frelinghuysen Road, Piscataway NJ 08554
P: 848.445.4938 | E: yuhe.liang@rcsb.org